July 7–12, 2025 • Kraków, Poland 🇵🇱
East European Bioinformatics and Computational Genomics Workshop 2025
Join EEBG 2025 and be a part of shaping the future of bioinformatics and computational genomics in Eastern Europe
— now in collaboration with 
and 
About EEBG
The East European Bioinformatics and Computational Genomics (EEBG) Workshop brings together researchers, students, and industry professionals in bioinformatics, computational genomics, medicine, and biology. This year, in its fourth successful year, EEBG 2025 will be held at the Jagiellonian University in Kraków, Poland, from July 7 to July 12, 2025. This exciting event will feature many world-class speakers with real-life expertise in genomics, transcriptomics, metagenomics, phylogenetics, and bioinformatics, and include two full on-site workshops by Oxford Nanopore Technologies and Nvidia.
July 7–12, 2025
April 2– Call for Applications Starts June 5 – Confirmation of Participation July 7 – The Course Begins
Małopolska Centre of Biotechnology
Jagiellonian University
Gronostajowa 7
Kraków, Poland
Primary goal
Our primary goal is to connect promising bioinformatics students from Eastern and Central Europe with the latest advancements in genomics and bioinformatics, creating bridges with renowned researchers from Western Europe, the USA, Japan, and beyond. We expect 40 on-site participants and 100 online attendees, supported by over a dozen international faculty members. The workshop will feature lectures and hands-on sessions that provide practical skills in modern genomic data analysis—from variant calling and ancestry inference to AI-driven biomedical approaches.
This training program will equip the next generation of scientists with the skills to further genomics research and personalized medicine. Additionally, by promoting international collaboration, we aim to expose students to various methodological approaches and perspectives, enhancing the overall caliber of their education and preparing them for an increasingly global scientific community.
“We are excited to bring EEBG to Poland. An important outcome of this collaboration involves encouraging young scientists from Poland and neighboring countries to become active in genome data analysis. Our workshop will serve as a hub for training students in the latest techniques, helping them gain hands-on experience using real-world datasets enriched with clinical and environmental information. We look forward to fostering international collaboration and preparing students for an increasingly global scientific community.”
Organizing
Committee
Join Our Bioinformatics Workshop!
An important outcome of this collaboration involves encouraging young scientists from Poland and neighboring countries to become active in genome data analysis. Given both the extensive research underway—encompassing genetic sequencing and the integration of environmental and medical histories—and the interdisciplinary nature of bioinformatics (biology, computer science, and statistics), there is a strong justification for creating a dedicated workshop. Such a workshop will build on our collaborative teams’ research strengths and serve as a hub for training students in the latest techniques. Participants will gain hands-on experience working with comprehensive datasets of sequenced and genotyped samples enriched with clinical and environmental information. They will learn to perform analyses ranging from variant identification to ancestry inference, leveraging cutting-edge computational tools.
Seeking Sponsors – Join Our Cause!
To sustain these efforts, we are seeking sponsors who can help us invite leading experts from institutions across Europe. While many have offered to speak without fees, we need financial support for travel costs (estimated at $600 per speaker). We aim to raise $10,000 to bring up to 10 visiting faculty members to Kraków for meaningful engagement with students and scholars.
“We were fortunate to learn from top professors—people who shaped the field of bioinformatics. They answered every question in a way that was understandable for beginners.”
“I found my PhD supervisor here at EEBG… It was a truly exceptional experience that blended learning and teaching, reconnecting with old friends and forging new connections.”
“The program was diverse, with engaging presentations and hands-on activities by experts. I gained a comprehensive understanding of bioinformatics methods and collaborative opportunities.”
“I had the privilege of participating in the Bioinformatics School and it was an exceptional experience. The hands-on sessions were particularly beneficial, allowing me to apply newly acquired concepts.”
Zgardan
Participation Options
We offer two modes of participation: in-person attendance at Jagiellonian University or remote participation (for those unable to travel).
In-person attendance at Jagiellonian University
All lectures and workshops will take place at MCB, an innovative facility equipped to host interactive sessions and hands-on computational labs.
Limited travel fellowships are available for qualifying in-person attendees.
Remote Participation
For those unable to travel, we offer a remote participation option.
You can secure your spot by filling in the Application Form.
Jagiellonian University in Krakow
the second oldest university in Central Europe, a pearl of history, science and culture that delights with its charm and heritage!
Exceptional International Faculty
Now in its fourth successful year, the EEBG has previously been held in Moldova and Romania, and we are excited to bring it to Poland. Our overarching aim is to connect promising bioinformatics students from Eastern and Central Europe with cutting-edge advancements in Genomics and Bioinformatics and to bridge them with researchers from Western Europe, the USA, Japan, and other regions engaged in active genomic research. While Polish students will make up a substantial portion of our attendees, we are also reaching out to students across the region, with particular outreach to Ukrainian refugee students.
Speakers Highlight
We anticipate a distinguished lineup of speakers, including Dr. Andre Uitterlinden (head of the Genome of Europe Consortium), Dr. Pawel Labaj (Jagiellonian University), Dr. Serghei Mangul (BioinformaticsForUkraine and USC), and other leading experts from the USA, Europe, and beyond. Stay tuned for the detailed list of speakers and session schedule.
Organizing Committee
Meet the dedicated team behind the East European Bioinformatics and Computational Genomics (EEBG) Workshop 2025 in Kraków, Poland. Their collective expertise spans genomics, bioinformatics, computational biology, and beyond, ensuring a dynamic and enriching experience for all participants.
Prof. dr
Paweł Łabaj
Jagiellonian University
Małopolska Centre of Biotechnology
Paweł Łabaj leads the Bioinformatics Group at the Małopolska Centre of Biotechnology, specializing in metagenomics, transcriptomics, and advanced data analysis. He has extensive experience in managing large-scale research projects, promoting reproducible science, and mentoring emerging scientists in bioinformatics.
Dr.
Serghei Mangul
University of Southern California
Bioinformatics for Ukraine
Serghei Mangul is an Assistant Professor of Clinical Pharmacy and Computational Biology at USC. His lab focuses on scalable and transparent computational approaches in genomics. Dr. Mangul’s contributions emphasize reproducibility, open data, and accessible bioinformatics education, reflecting his vision for an equitable future in biomedical research.
Dr.
Taras K. Oleksyk
Oakland University
Bioinformatics for Ukraine
Taras Oleksyk is a US Fulbright Scholar in Poland. His research centers on evolution, genomics, and conservation genetics. Dr. Oleksyk has successfully run multiple international genomics projects and international meetings, working closely with local institutions to foster community-oriented bioinformatics training.
Prof. dr
Joanna Polańska
Silesian University of Technology,
Poland
Joanna Polańska is a leading data scientist and bioinformatician known for her innovative approaches to analyzing high-dimensional biological datasets. Her work emphasizes computational solutions for genome annotation, variant interpretation, and translational bioinformatics, making her a key figure in Polish bioinformatics education.
Dr.
Krzysztof Szade
Jagiellonian University
Faculty of Biochemistry, Biophysics
and Biotechnology
Krzysztof Szade is a researcher at the Stem Cell Biology Laboratory at the Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University. His research focuses on hematopoietic stem cells (HSCs), particularly their aging, epigenetic memory, and role in the development of leukemia. He leads an ERC-funded project investigating how HSCs adapt to stress and how their interactions with the bone marrow niche influence blood formation and disease.
MSc Student
Daryna Yakymenko
Jagiellonian University
Faculty of Biochemistry, Biophysics
and Biotechnology
Daryna Yakymenko is actively involved in initiatives and collaborations focused on connecting local students to global advancements in genomics and computational biology. Her organizational efforts help shape EEBG as a hub of knowledge exchange and professional development.
Dr.
Guillem Ylla
Jagiellonian University
Faculty of Biochemistry, Biophysics
and Biotechnology
Guillem Ylla leads the Bioinformatics and Genome Biology Laboratory at the Jagiellonian University. His research explores evolutionary innovations and gene regulatory networks using multi-omics approaches. With postdoctoral experience from Harvard and the University of Florida, he combines evolutionary biology with computational methods to study how genomes shape complex phenotypes.
Organizers
Jagiellonian University in Cracow
Jagiellonian University in Kraków, founded in 1364, is the oldest university in Poland and one of the oldest in Europe, renowned for its rich academic tradition and notable alumni like Nicolaus Copernicus. Today, it is a leading center for life sciences with cutting-edge research in various scientific fields.
Małopolska Centre of Biotechnology
The Małopolska Centre of Biotechnology (MCB) is a modern life sciences institute at Jagiellonian University in Kraków, specializing in biotechnology, bioinformatics, and molecular biology. It integrates advanced infrastructure with global research networks, positioning itself as a regional innovation leader.
The Faculty of Biochemistry, Biophysics and Biotechnology (FBBB) is a top research unit of Jagiellonian University, specializing in molecular life sciences and inflammation biology. It leads nationally in funding and innovation, with strong international ties and acclaimed academic programs.
Oakland University
Oakland University (OU) is a public research university in Metro Detroit, serving nearly 16,000 students with career-focused, hands-on education. Founded in 1957, OU combines academic excellence, industry partnerships, and global engagement, positioning itself as a regional leader in innovation and impact.
Thank you for support us.
Sponsors and Partners
A globally established biotechnology company and industry leader in the fields of epigenetics, microbiomics and the emerging Next-Gen Sequencing space.
A company with novel generation of portable DNA/RNA sequencing technology that is fast, accessible, easy to use, and provides rich data for bioinformatics analysis.
Biomedica is a trusted life sciences distributor in Central Europe, delivering medical and diagnostic solutions with a focus on quality, innovation, and local expertise.
City of Cracow
Kraków is a historic Polish city known for its medieval architecture, UNESCO-listed Old Town, and vibrant academic and research scene rooted in centuries of tradition.
BGI Genomics is the world's leading integrated solutions provider of precision medicine, now serving customers in more than 100 countries, involving over 2,300 medical institutions.
NVIDIA DLI University Ambassador Program enables educators to teach free, hands-on AI and computing workshops using GPU-accelerated tools, supported by NVIDIA training resources and certification.
The Maj Institute of Pharmacology (IF PAN) is a top Polish research center focused on neuropsychopharmacology, brain science, and mental health, combining advanced research with international collaboration and education.
Bioinformatics for Ukraine is an initiative supporting Ukrainian scientists through education and collaboration in bioinformatics, offering mentorship programs, workshops, and seminars.
IT Business Group empowers organizations with scalable IT infrastructure, secure systems integration, and expert consulting across critical technology domains.
Venue
All lectures and workshops will take place at MCB, an innovative facility equipped to host interactive sessions and hands-on computational labs.
For any questions, sponsorship opportunities, or general inquiries:
support@eebg2025.edu.pl
Małopolska Centre of Biotechnology (MCB)
Jagiellonian University
Gronostajowa 7,
30-387 Kraków, Poland
Map
For your convenience, please refer to the map below to find the exact location: