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Join one of Eastern Europe's biggest summer schools in Computational Genomics and Bioinformatics!

This summer in Poland connect, learn, and innovate with leading experts in the field.
Don’t miss this chance to deepen your knowledge and expand your network!

Discover more

Schedule

Find out what’s waiting for you!

Day 1

Monday, July 7

Frontiers in Computational Biology

MCB Auditorium
Ground Floor

Chairman

DEM
Host

dr Danuta Earnshaw Mossakowska

38f17e66-4044-4540-b515-82f2d35491aa
Host

dr Paweł Łabaj

Registration
  • 9:00 – 9:30
Welcome & Opening Remarks

MCB Director, Local Organizing Committee

  • 9:30 – 9:45
  • dr Danuta Earnshaw Mossakowska
TBP

  • 9:45 – 10:15
  • Prof. Taras Oleksyk, Oakland University, USA
Evolutionary modeling and molecular adaptation

  • 10:15 – 10:45
  • Dr. Alexander Lucaci, Weill Cornel Medicine, USA
Coffee Break
  • 10:45 – 11:00
Computational potential in drug design and pharmacogenomic research
  • 11:00 – 11:30
  • Dr Sabina Podlewska, IF PAN, Poland
TBP
  • 11:30 – 12:00
  • Prof. Serghei Mangul
Lunch
  • 12:00 – 13:00
Galaxy Platform for Genome Annotation and Analysis

Hands-On Workshop

  • 13:00 – 15:00
  • Dr. Anton Nekrutenko, Penn State, USA
Coffee Break
  • 15:00 – 15:15
Galaxy Platform for Genome Annotation and Analysis

Hands-On Workshop

  • 15:15 – 16:45
  • Dr. Anton Nekrutenko, Penn State, USA
Wrap-Up & Discussion
  • 16:45 – 17:15
Day 2

Tuesday, July 8

Metagenomics

MCB Auditorium
Ground Floor

Chairman

DEM
Host

dr Danuta Earnshaw Mossakowska

38f17e66-4044-4540-b515-82f2d35491aa
Host

dr Paweł Łabaj

Daily Announcements
  • 9:00 – 9:15
The role of the gut microbiome in precision medicine
  • 9:15 – 9:45
  • Dr. Tomasz Kościółek, Sano Science, Poland
TBP
  • 9:45 – 10:15
  • Prof. Serghei Mangul
Coffee Break
  • 10:15 – 10:30
Shaping the future city with urban microbiome
  • 10:30 – 11:00
  • Prof. Paweł Łabaj, MCB UJ, Poland
Healthy microbiome—moving towards functional interpretation
  • 11:00 – 11:30
  • Dr Kinga Zielińska, MCB UJ, Poland
Lunch
  • 11:30 – 12:30
Metagenomics data analysis

Hands-On Workshop

  • 12:30 – 14:30
  • Dr. Kinga Zielińska, MCB UJ
Coffee Break
  • 14:30 – 14:45
Metagenomics data analysis

Workshop Continuation & Q&A

  • 14:45 – 16:30
  • Dr. Kinga Zielińska, MCB UJ
Wrap-Up & Discussion
  • 16:30 – 17:00
Day 3

Wednesday, July 9

Omics in Personalized Medicine

MCB Auditorium
Ground Floor

Chairman

DEM
Host

dr Danuta Earnshaw Mossakowska

38f17e66-4044-4540-b515-82f2d35491aa
Host

dr Paweł Łabaj

Daily Announcements
  • 9:00 – 9:15
The Genome of Europe and Implementation of Genetic Information in Healthcare and Prevention
  • 9:15 – 10:00
  • Prof. Andre Uitterlinden, Erasmus MC, The Netherlands
Novel Omics Approaches to Genome Annotation and Personalized Medicine
  • 10:00 – 10:45
  • Prof. Ugur Sezerman, Acibadem University, Turkey
Coffee Break
  • 10:45 – 11:00
TBP
  • 11:00 – 11:30
  • Prof. Joanna Polańska, Silesian University of Technology, Poland
Personalized Medicine with Digital-Twin
  • 11:30 – 12:15
  • Prof. Joaquin Dopazo, Andalusian Public Foundation Progress and Health, Spain
Computational Analysis of NGS Data for Clinical Diagnostics
  • 12:15 – 13:00
  • Prof. Stephan Ossowski, University of Tübingen, Germany
Lunch
  • 13:00 – 14:00
Phylogenomics Using Geneious Software

Hands-On Workshop

  • 14:00 – 15:30
  • Dr. Audrey Majeske, Oakland University, USA
Coffee Break
  • 15:30 – 15:45
Phylogenomics Using Geneious Software

Workshop continuation

  • 15:45 – 17:00
  • Dr. Audrey Majeske, Oakland University, USA​
Wrap-Up & Discussion
  • 17:00 – 17:15
Day 4

Thursday, July 10

ONT Day

MCB Auditorium
Ground Floor

Chairman

DEM
Host

dr Danuta Earnshaw Mossakowska

38f17e66-4044-4540-b515-82f2d35491aa
Host

dr Paweł Łabaj

Daily Announcements
  • 9:00 – 9:15
Augmenting the Transcriptional Landscape in Disease with Targeted Long-Reads Sequencing
  • 9:15 – 10:00
  • Prof. Paweł Łabaj, MCB UJ, Poland
Oxford Nanopore Technologies
  • 10:00 – 10:30
  • ONT Speaker
Coffee Break
  • 10:30 – 10:45
Oxford Nanopore Technologies
  • 10:45 – 11:30
  • ONT Speaker
Lunch
  • 11:30 – 12:30
Oxford Nanopore Technologies

Hands-On Workhop

  • 12:30 – 14:30
  • ONT
Coffee Break
  • 14:30 – 14:45
Workshop Continuation & Discussion
  • 14:45 – 16:30
Wrap-Up & Discussion
  • 16:30 – 17:00
ONT Dinner
  • 18:00 – 21:00
Day 5

Friday, July 11

Transcriptomics

MCB Auditorium
Ground Floor

Chairman

DEM
Host

dr Danuta Earnshaw Mossakowska

38f17e66-4044-4540-b515-82f2d35491aa
Host

dr Paweł Łabaj

Daily Announcements
  • 9:00 – 9:15
Using bioinformatics for basic research on animal evolution and development
  • 9:15 – 9:45
  • Dr Guillem Ylla, FBBB UJ, Poland
TBD
  • 9:45 – 10:15
  • Dr Krzysztof Szade, FBBB UJ, Poland
Coffee Break
  • 10:15 – 10:30
The Art of Biological Interpretation algorithms
  • 10:30 – 11:00
  • Dr Joanna Żyła, Silesian University of Technology, Poland
Antarctic Microbiomes: Extremophiles and Ecological Insights
  • 11:00 – 11:30
  • Dr Mariia Pavlovska, Vernadsky Antarctic Station, Ukraine
Lunch
  • 11:30 – 12:30
Transcriptomics data analysis

Hand-On Workshop

  • 12:30 – 14:30
  • Dr Tomasz Gaczorek, FBBB UJ, Poland
Coffee Break
  • 14:30 – 14:45
Transcriptomics data analysis

Hand-On Workshop

  • 14:45 – 16:15
  • Dr Tomasz Gaczorek, FBBB UJ, Poland
Conference Wrap-Up & Closing Remarks

Panel Discussion

  • 16:15 – 16:30
  • Organizing Committee
Certificate Award Ceremony & Farewell
  • 16:30 – 17:00
Day 6

Saturday, July 12

Nvidia Workshop

MCB Auditorium
Ground Floor

Chairman

DEM
Host

dr Danuta Earnshaw Mossakowska

38f17e66-4044-4540-b515-82f2d35491aa
Host

dr Paweł Łabaj

Places are limited. Separate registration is required.
Speeding up glycoprotein modeling - from coarse-grained models to glycan grafting
  • 9:0 – 9:45
  • Dr Mateusz Sikora, MCB UJ, Poland
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Małopolska Centre of Biotechnology

Jagiellonian University
Gronostajowa 7
Kraków, Poland